Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.96■□□□□ 0.95
USP6P35125 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 AC079178.1-201ENST00000420915 656 ntBASIC20.96■□□□□ 0.95
USP6P35125 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 HIST2H2BC-201ENST00000498492 580 ntBASIC20.96■□□□□ 0.95
USP6P35125 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
USP6P35125 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC20.96■□□□□ 0.95
USP6P35125 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6P35125 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
USP6P35125 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
USP6P35125 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6P35125 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP6P35125 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
USP6P35125 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP6P35125 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
USP6P35125 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
USP6P35125 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.95■□□□□ 0.95
USP6P35125 AKR7A2P1-201ENST00000460134 915 ntBASIC20.95■□□□□ 0.95
USP6P35125 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.95■□□□□ 0.95
USP6P35125 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
USP6P35125 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC20.95■□□□□ 0.95
USP6P35125 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
USP6P35125 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.95■□□□□ 0.95
USP6P35125 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.95
USP6P35125 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6P35125 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6P35125 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.95■□□□□ 0.94
USP6P35125 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.95■□□□□ 0.94
USP6P35125 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6P35125 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.95■□□□□ 0.94
USP6P35125 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.95■□□□□ 0.94
USP6P35125 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6P35125 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.95■□□□□ 0.94
USP6P35125 POM121L10P-201ENST00000436994 1285 ntBASIC20.95■□□□□ 0.94
USP6P35125 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP6P35125 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.95■□□□□ 0.94
USP6P35125 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.95■□□□□ 0.94
USP6P35125 SAMD11P1-201ENST00000571429 661 ntBASIC20.95■□□□□ 0.94
USP6P35125 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.95■□□□□ 0.94
USP6P35125 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
USP6P35125 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6P35125 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
USP6P35125 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 AC104457.1-201ENST00000401024 814 ntBASIC20.94■□□□□ 0.94
USP6P35125 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6P35125 AC106820.3-201ENST00000561653 397 ntBASIC20.94■□□□□ 0.94
USP6P35125 AL603832.2-201ENST00000566195 2125 ntBASIC20.94■□□□□ 0.94
USP6P35125 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.94■□□□□ 0.94
USP6P35125 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6P35125 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP6P35125 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6P35125 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP6P35125 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 BLK-205ENST00000529894 2017 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6P35125 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
USP6P35125 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.93■□□□□ 0.94
USP6P35125 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.93■□□□□ 0.94
USP6P35125 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6P35125 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms