Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB4P30926 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB4P30926 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB4P30926 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRNB4P30926 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CHRNB4P30926 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CHRNB4P30926 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB4P30926 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB4P30926 AC092850.2-201ENST00000623821 2697 ntBASIC14.03□□□□□ -0.16
CHRNB4P30926 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB4P30926 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CHRNB4P30926 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB4P30926 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB4P30926 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHRNB4P30926 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHRNB4P30926 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRNB4P30926 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRNB4P30926 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRNB4P30926 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
CHRNB4P30926 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB4P30926 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CHRNB4P30926 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.02□□□□□ -0.17
CHRNB4P30926 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CHRNB4P30926 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRNB4P30926 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CHRNB4P30926 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRNB4P30926 BNIP3P42-201ENST00000454982 569 ntBASIC14.02□□□□□ -0.17
CHRNB4P30926 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRNB4P30926 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CHRNB4P30926 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB4P30926 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CHRNB4P30926 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB4P30926 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRNB4P30926 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.02□□□□□ -0.17
CHRNB4P30926 BNIP3P29-201ENST00000598302 571 ntBASIC14.02□□□□□ -0.17
CHRNB4P30926 AC011447.5-201ENST00000616168 564 ntBASIC14.02□□□□□ -0.17
CHRNB4P30926 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CHRNB4P30926 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB4P30926 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB4P30926 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB4P30926 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
CHRNB4P30926 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB4P30926 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB4P30926 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 PDIA3P1-201ENST00000471856 1510 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB4P30926 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB4P30926 ANKRD19P-201ENST00000338192 862 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB4P30926 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CHRNB4P30926 SOCS2P1-201ENST00000417727 557 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRNB4P30926 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB4P30926 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.01□□□□□ -0.17
CHRNB4P30926 TARDBPP1-201ENST00000442013 1203 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 CTBP2P5-201ENST00000454986 1264 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB4P30926 FAM8A2P-201ENST00000528813 1142 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 PTP4A1P2-201ENST00000546033 454 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.01□□□□□ -0.17
CHRNB4P30926 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.01□□□□□ -0.17
CHRNB4P30926 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB4P30926 BRI3BPP1-201ENST00000594224 787 ntBASIC14.01□□□□□ -0.17
CHRNB4P30926 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms