Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 AC007967.4-201ENST00000614700 386 ntBASIC14.55□□□□□ -0.08
SHC1P29353 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
SHC1P29353 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.55□□□□□ -0.08
SHC1P29353 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHC1P29353 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.54□□□□□ -0.08
SHC1P29353 MTND6P24-201ENST00000440466 518 ntBASIC14.54□□□□□ -0.08
SHC1P29353 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 FAM86GP-201ENST00000448322 971 ntBASIC14.54□□□□□ -0.08
SHC1P29353 AC125807.1-201ENST00000483097 614 ntBASIC14.54□□□□□ -0.08
SHC1P29353 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.54□□□□□ -0.08
SHC1P29353 RFPL4AP1-201ENST00000530883 850 ntBASIC14.54□□□□□ -0.08
SHC1P29353 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.54□□□□□ -0.08
SHC1P29353 DUX4L27-201ENST00000554796 1261 ntBASIC14.54□□□□□ -0.08
SHC1P29353 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.54□□□□□ -0.08
SHC1P29353 AC093512.1-201ENST00000617969 520 ntBASIC14.54□□□□□ -0.08
SHC1P29353 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.54□□□□□ -0.08
SHC1P29353 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.54□□□□□ -0.08
SHC1P29353 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SHC1P29353 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.53□□□□□ -0.08
SHC1P29353 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.53□□□□□ -0.08
SHC1P29353 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHC1P29353 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SHC1P29353 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SHC1P29353 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 KLF2P3-201ENST00000451977 1087 ntBASIC14.53□□□□□ -0.08
SHC1P29353 AC245100.5-201ENST00000452108 331 ntBASIC14.53□□□□□ -0.08
SHC1P29353 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.53□□□□□ -0.08
SHC1P29353 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.53□□□□□ -0.08
SHC1P29353 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.53□□□□□ -0.08
SHC1P29353 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.53□□□□□ -0.08
SHC1P29353 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.53□□□□□ -0.08
SHC1P29353 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.53□□□□□ -0.08
SHC1P29353 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.53□□□□□ -0.08
SHC1P29353 AC027796.2-201ENST00000575326 344 ntBASIC14.53□□□□□ -0.08
SHC1P29353 AC015911.4-201ENST00000588022 1070 ntBASIC14.53□□□□□ -0.08
SHC1P29353 AL133215.2-201ENST00000609242 977 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms