Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.59□□□□□ -0.07
ABCD3P28288 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ABCD3P28288 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
ABCD3P28288 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCD3P28288 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.58□□□□□ -0.07
ABCD3P28288 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCD3P28288 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.58□□□□□ -0.07
ABCD3P28288 TSPY26P-202ENST00000565928 3884 ntBASIC14.58□□□□□ -0.07
ABCD3P28288 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ABCD3P28288 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 AC074338.1-201ENST00000416825 156 ntBASIC14.58□□□□□ -0.08
ABCD3P28288 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.58□□□□□ -0.08
ABCD3P28288 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.58□□□□□ -0.08
ABCD3P28288 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.58□□□□□ -0.08
ABCD3P28288 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 AC009118.2-201ENST00000613275 655 ntBASIC14.58□□□□□ -0.08
ABCD3P28288 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.58□□□□□ -0.08
ABCD3P28288 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.58□□□□□ -0.08
ABCD3P28288 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.58□□□□□ -0.08
ABCD3P28288 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.58□□□□□ -0.08
ABCD3P28288 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ABCD3P28288 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.58□□□□□ -0.08
ABCD3P28288 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ABCD3P28288 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.57□□□□□ -0.08
ABCD3P28288 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 AC007950.2-201ENST00000615045 2347 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.57□□□□□ -0.08
ABCD3P28288 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 RPL13P2-201ENST00000440687 659 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 FAM207CP-201ENST00000443486 507 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 SPDYE18-201ENST00000510091 1050 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.57□□□□□ -0.08
ABCD3P28288 AC104794.3-201ENST00000566840 1248 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.57□□□□□ -0.08
ABCD3P28288 MIR4745-201ENST00000577608 62 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 LINC01115-203ENST00000606068 577 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
ABCD3P28288 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 AC023824.1-201ENST00000562945 2975 ntBASIC14.57□□□□□ -0.08
ABCD3P28288 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.57□□□□□ -0.08
ABCD3P28288 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ABCD3P28288 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms