Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX1P22670 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 AP3S2-216ENST00000617003 1561 ntBASIC17.22■□□□□ 0.35
RFX1P22670 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX1P22670 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX1P22670 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
RFX1P22670 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RFX1P22670 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX1P22670 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX1P22670 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX1P22670 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX1P22670 AL590560.3-201ENST00000623350 461 ntBASIC17.21■□□□□ 0.35
RFX1P22670 AC079416.2-201ENST00000625035 1193 ntBASIC17.21■□□□□ 0.35
RFX1P22670 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX1P22670 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX1P22670 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RFX1P22670 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.21■□□□□ 0.34
RFX1P22670 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX1P22670 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX1P22670 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX1P22670 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX1P22670 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFX1P22670 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFX1P22670 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFX1P22670 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFX1P22670 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX1P22670 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RFX1P22670 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 AL450472.2-201ENST00000603663 1156 ntBASIC17.2■□□□□ 0.34
RFX1P22670 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX1P22670 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RFX1P22670 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX1P22670 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms