Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 AC023157.3-201ENST00000619086 2088 ntBASIC14.15□□□□□ -0.14
SPARCP09486 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.15□□□□□ -0.14
SPARCP09486 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 BNIP3P1-202ENST00000550043 1585 ntBASIC14.15□□□□□ -0.14
SPARCP09486 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SPARCP09486 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.15□□□□□ -0.14
SPARCP09486 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.15□□□□□ -0.14
SPARCP09486 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.15□□□□□ -0.14
SPARCP09486 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.15□□□□□ -0.14
SPARCP09486 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SPARCP09486 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SPARCP09486 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
SPARCP09486 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SPARCP09486 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SPARCP09486 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPARCP09486 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.15
SPARCP09486 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.14□□□□□ -0.15
SPARCP09486 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 SPDYE11-202ENST00000450699 704 ntBASIC14.14□□□□□ -0.15
SPARCP09486 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.14□□□□□ -0.15
SPARCP09486 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SPARCP09486 SPDYE9P-201ENST00000570642 692 ntBASIC14.14□□□□□ -0.15
SPARCP09486 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SPARCP09486 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 SPDYE10P-202ENST00000612005 668 ntBASIC14.14□□□□□ -0.15
SPARCP09486 SPDYE8P-202ENST00000612377 668 ntBASIC14.14□□□□□ -0.15
SPARCP09486 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.14□□□□□ -0.15
SPARCP09486 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.14□□□□□ -0.15
SPARCP09486 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.14□□□□□ -0.15
SPARCP09486 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 AC092902.6-201ENST00000641783 218 ntBASIC14.14□□□□□ -0.15
SPARCP09486 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SPARCP09486 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.14□□□□□ -0.15
SPARCP09486 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.14□□□□□ -0.15
SPARCP09486 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.14□□□□□ -0.15
SPARCP09486 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPARCP09486 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.13□□□□□ -0.15
SPARCP09486 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SPARCP09486 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SPARCP09486 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SPARCP09486 AC105250.1-201ENST00000509378 2057 ntBASIC14.13□□□□□ -0.15
SPARCP09486 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.13□□□□□ -0.15
SPARCP09486 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPARCP09486 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.13□□□□□ -0.15
SPARCP09486 REXO1L1P-202ENST00000608646 1974 ntBASIC14.13□□□□□ -0.15
SPARCP09486 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
SPARCP09486 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPARCP09486 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms