Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 C2orf69P2-201ENST00000562032 1123 ntBASIC18.74■□□□□ 0.59
COL1A1P02452 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.74■□□□□ 0.59
COL1A1P02452 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.74■□□□□ 0.59
COL1A1P02452 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
COL1A1P02452 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL1A1P02452 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL1A1P02452 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.73■□□□□ 0.59
COL1A1P02452 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.73■□□□□ 0.59
COL1A1P02452 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL1A1P02452 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.73■□□□□ 0.59
COL1A1P02452 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.73■□□□□ 0.59
COL1A1P02452 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.73■□□□□ 0.59
COL1A1P02452 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.73■□□□□ 0.59
COL1A1P02452 MIR3615-201ENST00000581999 87 ntBASIC18.73■□□□□ 0.59
COL1A1P02452 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.73■□□□□ 0.59
COL1A1P02452 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL1A1P02452 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL1A1P02452 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
COL1A1P02452 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 ACKR1-201ENST00000368121 1240 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 FAM197Y7-201ENST00000432892 766 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 C2orf27AP3-201ENST00000434123 579 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.72■□□□□ 0.59
COL1A1P02452 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.72■□□□□ 0.59
COL1A1P02452 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.72■□□□□ 0.59
COL1A1P02452 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 AL354718.3-201ENST00000616414 581 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 CR382287.1-201ENST00000623954 586 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.72■□□□□ 0.59
COL1A1P02452 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.72■□□□□ 0.59
COL1A1P02452 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL1A1P02452 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.72■□□□□ 0.59
COL1A1P02452 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL1A1P02452 KRT8P35-201ENST00000483942 1338 ntBASIC18.72■□□□□ 0.59
COL1A1P02452 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
COL1A1P02452 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL1A1P02452 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COL1A1P02452 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
COL1A1P02452 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL1A1P02452 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL1A1P02452 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.71■□□□□ 0.59
COL1A1P02452 KLF2P2-201ENST00000416807 1039 ntBASIC18.71■□□□□ 0.59
COL1A1P02452 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.71■□□□□ 0.59
COL1A1P02452 KRT8P13-201ENST00000463294 1010 ntBASIC18.71■□□□□ 0.59
COL1A1P02452 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.71■□□□□ 0.59
COL1A1P02452 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL1A1P02452 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms