Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.51■□□□□ 0.23
BEST1O76090 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.51■□□□□ 0.23
BEST1O76090 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.51■□□□□ 0.23
BEST1O76090 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 KRT18P43-201ENST00000469825 1281 ntBASIC16.51■□□□□ 0.23
BEST1O76090 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.51■□□□□ 0.23
BEST1O76090 AC092552.1-201ENST00000547243 906 ntBASIC16.51■□□□□ 0.23
BEST1O76090 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 AC015910.1-201ENST00000579400 975 ntBASIC16.51■□□□□ 0.23
BEST1O76090 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.51■□□□□ 0.23
BEST1O76090 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 AC027307.3-201ENST00000594262 1100 ntBASIC16.51■□□□□ 0.23
BEST1O76090 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 AC000095.1-201ENST00000603208 874 ntBASIC16.51■□□□□ 0.23
BEST1O76090 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST1O76090 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST1O76090 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST1O76090 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST1O76090 AC105250.1-201ENST00000509378 2057 ntBASIC16.5■□□□□ 0.23
BEST1O76090 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST1O76090 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST1O76090 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 COX5BP8-201ENST00000416911 349 ntBASIC16.5■□□□□ 0.23
BEST1O76090 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST1O76090 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.5■□□□□ 0.23
BEST1O76090 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 TMEM261P1-201ENST00000604899 340 ntBASIC16.5■□□□□ 0.23
BEST1O76090 AC012645.4-201ENST00000610691 1061 ntBASIC16.5■□□□□ 0.23
BEST1O76090 WFDC1-204ENST00000613603 549 ntBASIC16.5■□□□□ 0.23
BEST1O76090 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST1O76090 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST1O76090 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.5■□□□□ 0.23
BEST1O76090 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST1O76090 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST1O76090 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BEST1O76090 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
BEST1O76090 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
BEST1O76090 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST1O76090 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST1O76090 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BEST1O76090 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST1O76090 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.49■□□□□ 0.23
BEST1O76090 AL133267.1-201ENST00000398220 340 ntBASIC16.49■□□□□ 0.23
BEST1O76090 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
BEST1O76090 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST1O76090 NME2P1-201ENST00000426182 414 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms