Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP2AO43633 PAUPAR-201ENST00000630360 2965 ntBASIC17.78■□□□□ 0.44
CHMP2AO43633 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP2AO43633 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP2AO43633 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP2AO43633 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP2AO43633 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP2AO43633 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP2AO43633 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP2AO43633 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMP2AO43633 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMP2AO43633 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHMP2AO43633 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP2AO43633 AC015922.1-201ENST00000421102 1152 ntBASIC17.77■□□□□ 0.44
CHMP2AO43633 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHMP2AO43633 SLED1-202ENST00000512051 380 ntBASIC17.77■□□□□ 0.44
CHMP2AO43633 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMP2AO43633 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP2AO43633 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP2AO43633 AL662799.1-202ENST00000614205 422 ntBASIC17.77■□□□□ 0.44
CHMP2AO43633 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CHMP2AO43633 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMP2AO43633 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP2AO43633 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP2AO43633 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.77■□□□□ 0.43
CHMP2AO43633 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP2AO43633 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.77■□□□□ 0.43
CHMP2AO43633 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP2AO43633 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 DFFBP1-201ENST00000433250 979 ntBASIC17.76■□□□□ 0.43
CHMP2AO43633 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 MEIS3P1-201ENST00000495167 958 ntBASIC17.76■□□□□ 0.43
CHMP2AO43633 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.76■□□□□ 0.43
CHMP2AO43633 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP2AO43633 AC093004.1-201ENST00000508850 424 ntBASIC17.76■□□□□ 0.43
CHMP2AO43633 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.76■□□□□ 0.43
CHMP2AO43633 API5-211ENST00000534695 560 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CHMP2AO43633 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP2AO43633 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP2AO43633 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP2AO43633 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CHMP2AO43633 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CHMP2AO43633 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms