Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC083964.2-201ENST00000623988 2396 ntBASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 HLA-J-202ENST00000469281 1241 ntBASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TK1-204ENST00000590430 683 ntTSL 3 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AL136967.2-201ENST00000623968 743 ntBASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 AC136621.1-201ENST00000624017 2304 ntBASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 ARHGEF11-201ENST00000361409 5788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
CHKB-CPT1BH3BT56 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AC089987.1-201ENST00000551654 2209 ntBASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 KRT8P7-201ENST00000533003 1432 ntBASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC12A3-202ENST00000438926 5567 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AL512625.2-201ENST00000417533 625 ntBASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AC096631.2-201ENST00000436136 790 ntBASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 REXO2-208ENST00000539754 791 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC8.74□□□□□ -1.01
CHKB-CPT1BH3BT56 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms