Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 LINC00638-201ENST00000555578 2518 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC026797.1-201ENST00000624837 2869 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC130371.2-201ENST00000619443 611 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 GGT4P-201ENST00000623672 1708 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC023024.2-201ENST00000623561 1993 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 LSINCT5-201ENST00000626215 2647 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 AC131212.3-201ENST00000624087 4219 ntBASIC15.56■□□□□ 0.08
VGLL3A8MV65 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
VGLL3A8MV65 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VGLL3A8MV65 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 AL445209.1-201ENST00000607269 3491 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 AC012531.1-201ENST00000562848 2680 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 AC004951.3-201ENST00000418645 1148 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 TSPY15P-201ENST00000457163 923 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 Z85996.1-201ENST00000494644 937 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 FITM1-202ENST00000559294 800 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.55■□□□□ 0.08
VGLL3A8MV65 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 USO1-201ENST00000264904 4135 ntTSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
VGLL3A8MV65 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VGLL3A8MV65 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.54■□□□□ 0.08
VGLL3A8MV65 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 SLC22A20-204ENST00000530038 1673 ntBASIC15.54■□□□□ 0.08
VGLL3A8MV65 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.54■□□□□ 0.08
VGLL3A8MV65 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.54■□□□□ 0.08
VGLL3A8MV65 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VGLL3A8MV65 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms