Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
MBD3L3A6NE82 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC016694.1-201ENST00000434179 700 ntBASIC13.77□□□□□ -0.21
MBD3L3A6NE82 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 FTH1P14-201ENST00000482930 551 ntBASIC13.77□□□□□ -0.21
MBD3L3A6NE82 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC093525.8-201ENST00000624099 1342 ntBASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 AL033527.4-201ENST00000641026 673 ntBASIC13.77□□□□□ -0.21
MBD3L3A6NE82 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MBD3L3A6NE82 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 BNIP3P42-201ENST00000454982 569 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 KRT18P25-201ENST00000508931 1278 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 BNIP3P29-201ENST00000598302 571 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AC025181.2-201ENST00000606994 802 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AC011447.5-201ENST00000616168 564 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 BX539320.1-201ENST00000623759 877 ntBASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MBD3L3A6NE82 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L3A6NE82 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
MBD3L3A6NE82 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms