Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AC092474.2-201ENST00000424288 719 ntBASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AC108073.2-201ENST00000464002 357 ntBASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV3S1A0A5B6 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AL513480.1-201ENST00000451731 511 ntBASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 AC066615.1-201ENST00000640911 628 ntBASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 REXO1L2P-201ENST00000425429 2069 ntBASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TCRBV3S1A0A5B6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AC004987.2-201ENST00000395959 1148 ntBASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 REXO1L6P-202ENST00000619970 1078 ntBASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AP000550.4-202ENST00000639755 178 ntBASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.8□□□□□ -0.04
TCRBV3S1A0A5B6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms