Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 BTBD7P1-201ENST00000447253 1453 ntBASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC196A0A1B0GTZ2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 CYMP-203ENST00000474680 1263 ntBASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC196A0A1B0GTZ2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC127383.1-201ENST00000444697 1800 ntBASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC009477.1-201ENST00000452936 217 ntBASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AL512638.1-201ENST00000457493 794 ntBASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 SLED1-202ENST00000512051 380 ntBASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC196A0A1B0GTZ2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC196A0A1B0GTZ2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms