Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 PAUPAR-201ENST00000630360 2965 ntBASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 U91328.1-201ENST00000437528 223 ntBASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 KRT17P7-201ENST00000451704 1104 ntBASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 IGHV3-71-201ENST00000523324 359 ntBASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAI2Q9Y5P3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC046158.3-201ENST00000624947 2558 ntBASIC16■□□□□ 0.15
RAI2Q9Y5P3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 Z97205.2-201ENST00000564697 1639 ntBASIC16■□□□□ 0.15
RAI2Q9Y5P3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16■□□□□ 0.15
RAI2Q9Y5P3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI2Q9Y5P3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 MRPS18AP1-201ENST00000414458 589 ntBASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms