Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 BOLA2P3-201ENST00000404566 256 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 MIR1909-201ENST00000411312 80 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AC136604.1-201ENST00000418535 575 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AC008735.3-201ENST00000596646 500 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AL512343.1-201ENST00000605837 169 ntBASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NCKAP1Q9Y2A7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
NCKAP1Q9Y2A7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 TMEM14DP-201ENST00000422205 345 ntBASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 ENPP7P5-201ENST00000541031 1031 ntBASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 BRI3BPP1-201ENST00000594224 787 ntBASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 BTNL10-201ENST00000595971 695 ntBASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCKAP1Q9Y2A7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NCKAP1Q9Y2A7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms