Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 MROH4P-201ENST00000431302 1578 ntBASIC21■□□□□ 0.95
NPC1L1Q9UHC9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 RN7SL837P-201ENST00000463010 287 ntBASIC21■□□□□ 0.95
NPC1L1Q9UHC9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 IGHV3-72-202ENST00000621503 303 ntBASIC21■□□□□ 0.95
NPC1L1Q9UHC9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NPC1L1Q9UHC9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 GAPDHP21-201ENST00000450301 1010 ntBASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 MIR5189-201ENST00000577370 114 ntBASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NPC1L1Q9UHC9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 AL033527.5-201ENST00000641382 801 ntBASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 AC007787.1-201ENST00000588095 1583 ntBASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NPC1L1Q9UHC9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC022137.2-201ENST00000503482 481 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AL035252.4-201ENST00000624174 288 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms