Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
KCMF1Q9P0J7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.02■□□□□ -0
KCMF1Q9P0J7 SPCS2P1-201ENST00000561636 679 ntBASIC15.02■□□□□ -0
KCMF1Q9P0J7 AC010336.2-201ENST00000564226 506 ntBASIC15.02■□□□□ -0
KCMF1Q9P0J7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.02■□□□□ -0
KCMF1Q9P0J7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.02■□□□□ -0
KCMF1Q9P0J7 AL844908.2-201ENST00000609461 460 ntBASIC15.02■□□□□ -0
KCMF1Q9P0J7 AL390754.1-201ENST00000619088 582 ntBASIC15.02■□□□□ -0
KCMF1Q9P0J7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.02■□□□□ -0
KCMF1Q9P0J7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
KCMF1Q9P0J7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 LINC02228-204ENST00000642115 2962 ntBASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 BASP1P1-201ENST00000430708 665 ntBASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AC241585.1-201ENST00000433527 519 ntBASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
KCMF1Q9P0J7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 PAUPAR-201ENST00000630360 2965 ntBASIC15□□□□□ -0.01
KCMF1Q9P0J7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 AL607033.1-201ENST00000623900 1599 ntBASIC15□□□□□ -0.01
KCMF1Q9P0J7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
KCMF1Q9P0J7 FAM8A3P-201ENST00000427218 844 ntBASIC15□□□□□ -0.01
KCMF1Q9P0J7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 TARDBPP1-201ENST00000442013 1203 ntBASIC15□□□□□ -0.01
KCMF1Q9P0J7 BCRP1-201ENST00000444246 691 ntBASIC15□□□□□ -0.01
KCMF1Q9P0J7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15□□□□□ -0.01
KCMF1Q9P0J7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms