Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 UXT-AS1-201ENST00000590504 1525 ntBASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.27■□□□□ 0.03
LRTM1Q9HBL6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 PHKG1P2-201ENST00000457537 863 ntBASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 C20orf181-201ENST00000623918 480 ntBASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRTM1Q9HBL6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 AP3S2-216ENST00000617003 1561 ntBASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 MIR574-201ENST00000385209 96 ntBASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 EEF1DP4-201ENST00000446006 880 ntBASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 SLC25A39P2-201ENST00000537614 270 ntBASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 AL671883.3-201ENST00000603274 991 ntBASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRTM1Q9HBL6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
LRTM1Q9HBL6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms