Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.49□□□□□ -0.09
RSPO3Q9BXY4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 MROH4P-201ENST00000431302 1578 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AC084364.1-201ENST00000551967 1556 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AC013726.1-201ENST00000563747 2285 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 FO393414.2-201ENST00000405153 598 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AP000344.2-201ENST00000512987 629 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AC027612.4-201ENST00000605371 583 ntBASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RSPO3Q9BXY4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 UPF3AP3-201ENST00000420996 769 ntBASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 AL353705.2-201ENST00000428243 662 ntBASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 AL079307.3-201ENST00000556114 283 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms