Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 WASH6P-202ENST00000359512 1437 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC005840.4-201ENST00000541242 2494 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC011477.6-201ENST00000604980 1927 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC004967.1-201ENST00000453589 447 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC018845.2-201ENST00000568326 409 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 MIR4321-201ENST00000592276 80 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 MTDHP5-201ENST00000598980 586 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC079781.4-201ENST00000641908 219 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC073439.1-201ENST00000624121 1774 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC016027.1-202ENST00000607927 1699 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SNX18Q96RF0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 AL589702.1-201ENST00000641229 1509 ntBASIC14.51□□□□□ -0.09
SNX18Q96RF0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SNX18Q96RF0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 KRT19P2-202ENST00000557173 1012 ntBASIC14.5□□□□□ -0.09
SNX18Q96RF0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 AC004877.2-201ENST00000623941 599 ntBASIC14.5□□□□□ -0.09
SNX18Q96RF0 AC134684.3-201ENST00000641758 218 ntBASIC14.5□□□□□ -0.09
SNX18Q96RF0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.5□□□□□ -0.09
SNX18Q96RF0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 AP001282.1-201ENST00000531301 1499 ntBASIC14.5□□□□□ -0.09
SNX18Q96RF0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNX18Q96RF0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC025580.3-201ENST00000617932 1424 ntBASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms