Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 TUBB1P2-201ENST00000422712 1306 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 TUBB1P1-201ENST00000503144 1300 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 ELK2AP-201ENST00000392510 1007 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 HAUS4P1-201ENST00000406739 1145 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 BCRP2-202ENST00000447763 634 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 BCRP6-201ENST00000510112 632 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 BCRP7-201ENST00000511549 544 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 HNRNPUP1-201ENST00000554987 333 ntBASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNGAP1Q96PV0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 C1QBPP1-201ENST00000400117 770 ntBASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 RPL7P3-201ENST00000441388 714 ntBASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AP000812.2-201ENST00000538934 718 ntBASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AC009486.1-201ENST00000569860 813 ntBASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 AL450472.2-201ENST00000603663 1156 ntBASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNGAP1Q96PV0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNGAP1Q96PV0 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNGAP1Q96PV0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.89■□□□□ 0.46
SYNGAP1Q96PV0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 MIR1908-201ENST00000410394 80 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms