Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.64□□□□□ -0.07
HPS1Q92902 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HPS1Q92902 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.63□□□□□ -0.07
HPS1Q92902 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.63□□□□□ -0.07
HPS1Q92902 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.63□□□□□ -0.07
HPS1Q92902 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.63□□□□□ -0.07
HPS1Q92902 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.63□□□□□ -0.07
HPS1Q92902 UPF3AP3-201ENST00000420996 769 ntBASIC14.63□□□□□ -0.07
HPS1Q92902 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.63□□□□□ -0.07
HPS1Q92902 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.63□□□□□ -0.07
HPS1Q92902 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.63□□□□□ -0.07
HPS1Q92902 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.63□□□□□ -0.07
HPS1Q92902 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.63□□□□□ -0.07
HPS1Q92902 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HPS1Q92902 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.63□□□□□ -0.07
HPS1Q92902 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HPS1Q92902 AC136621.1-201ENST00000624017 2304 ntBASIC14.63□□□□□ -0.07
HPS1Q92902 AC148477.5-201ENST00000625164 1645 ntBASIC14.63□□□□□ -0.07
HPS1Q92902 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.62□□□□□ -0.07
HPS1Q92902 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.62□□□□□ -0.07
HPS1Q92902 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.62□□□□□ -0.07
HPS1Q92902 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
HPS1Q92902 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 AC097637.2-201ENST00000624096 1997 ntBASIC14.62□□□□□ -0.07
HPS1Q92902 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.62□□□□□ -0.07
HPS1Q92902 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
HPS1Q92902 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.62□□□□□ -0.07
HPS1Q92902 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.62□□□□□ -0.07
HPS1Q92902 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.62□□□□□ -0.07
HPS1Q92902 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HPS1Q92902 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.62□□□□□ -0.07
HPS1Q92902 AC009947.1-201ENST00000444350 727 ntBASIC14.62□□□□□ -0.07
HPS1Q92902 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.62□□□□□ -0.07
HPS1Q92902 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
HPS1Q92902 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
HPS1Q92902 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.62□□□□□ -0.07
HPS1Q92902 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HPS1Q92902 AC002347.1-201ENST00000569543 541 ntBASIC14.62□□□□□ -0.07
HPS1Q92902 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.62□□□□□ -0.07
HPS1Q92902 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms