Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AP002414.2-201ENST00000591780 3365 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AL353705.2-201ENST00000428243 662 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AC084121.4-201ENST00000641598 221 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AF228730.8-201ENST00000642140 221 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 AC018892.3-201ENST00000623986 2499 ntBASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP1Q8TDR0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 OR2I1P-210ENST00000642037 4691 ntBASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 AL513210.1-201ENST00000629608 234 ntBASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP1Q8TDR0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 YBX1P5-201ENST00000509441 847 ntBASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 LINC00554-201ENST00000564841 3011 ntBASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAF3IP1Q8TDR0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms