Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AC135586.1-201ENST00000539323 574 ntBASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AC004840.1-201ENST00000636359 365 ntBASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 KRT8P37-201ENST00000451609 1420 ntBASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 AP001282.1-201ENST00000531301 1499 ntBASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FNDC9Q8TBE3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AC007326.2-201ENST00000624224 7579 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AC105917.1-201ENST00000506637 2539 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 FO393414.2-201ENST00000405153 598 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AL035633.1-201ENST00000406139 838 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 BTBD7P1-201ENST00000447253 1453 ntBASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.29□□□□□ -0.12
FNDC9Q8TBE3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
FNDC9Q8TBE3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms