Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 CYP2T1P-202ENST00000641596 2535 ntBASIC16.1■□□□□ 0.17
CHPFQ8IZ52 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AC022210.1-201ENST00000449856 793 ntBASIC16.1■□□□□ 0.17
CHPFQ8IZ52 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AC008735.3-201ENST00000596646 500 ntBASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AL512343.1-201ENST00000605837 169 ntBASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.1■□□□□ 0.17
CHPFQ8IZ52 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AC074338.1-201ENST00000416825 156 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 HLA-V-201ENST00000429037 534 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 RPS2P32-201ENST00000439199 892 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AC133539.2-201ENST00000604757 467 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AL391069.4-201ENST00000609583 481 ntBASIC16.09■□□□□ 0.17
CHPFQ8IZ52 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms