Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC83Q8IWF9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AZGP1P1-201ENST00000411909 902 ntBASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AC005237.2-201ENST00000434368 219 ntBASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AC097359.3-201ENST00000603982 1210 ntBASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC83Q8IWF9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 BANF1P1-201ENST00000553684 263 ntBASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC093520.2-201ENST00000561830 333 ntBASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC005829.1-201ENST00000570002 483 ntBASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 MIR4469-201ENST00000583919 79 ntBASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 AC026979.3-201ENST00000607315 403 ntBASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC83Q8IWF9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 TCAF2P1-201ENST00000291129 2421 ntBASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC83Q8IWF9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms