Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 PMPCAP1-201ENST00000508114 1576 ntBASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
CROCCP3Q8IVE0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 MIR4492-201ENST00000581627 80 ntBASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 AC020765.3-201ENST00000613051 740 ntBASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 AC011474.4-201ENST00000623523 2076 ntBASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CROCCP3Q8IVE0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 LINC00982-205ENST00000420957 435 ntBASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 VENTXP7-201ENST00000475503 772 ntBASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 MPDU1-223ENST00000582151 728 ntBASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.41□□□□□ -0.1
CROCCP3Q8IVE0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms