Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 AL135999.2-201ENST00000622438 1686 ntBASIC16.66■□□□□ 0.26
ALYREFQ86V81 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 WASH6P-202ENST00000359512 1437 ntBASIC16.66■□□□□ 0.26
ALYREFQ86V81 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC105129.2-201ENST00000559536 390 ntBASIC16.66■□□□□ 0.26
ALYREFQ86V81 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 AC148477.9-201ENST00000623974 539 ntBASIC16.66■□□□□ 0.26
ALYREFQ86V81 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALYREFQ86V81 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.66■□□□□ 0.26
ALYREFQ86V81 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 CETN4P-206ENST00000642099 2168 ntBASIC16.65■□□□□ 0.26
ALYREFQ86V81 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.65■□□□□ 0.26
ALYREFQ86V81 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALYREFQ86V81 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
ALYREFQ86V81 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ALYREFQ86V81 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.64■□□□□ 0.26
ALYREFQ86V81 AC018665.1-201ENST00000622927 1362 ntBASIC16.64■□□□□ 0.26
ALYREFQ86V81 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALYREFQ86V81 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALYREFQ86V81 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALYREFQ86V81 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALYREFQ86V81 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 HMGA1P7-201ENST00000406908 502 ntBASIC16.64■□□□□ 0.25
ALYREFQ86V81 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALYREFQ86V81 RPL37AP1-201ENST00000412502 279 ntBASIC16.64■□□□□ 0.25
ALYREFQ86V81 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AC006033.1-201ENST00000440505 426 ntBASIC16.64■□□□□ 0.25
ALYREFQ86V81 UPF3AP2-201ENST00000457924 1132 ntBASIC16.64■□□□□ 0.25
ALYREFQ86V81 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.64■□□□□ 0.25
ALYREFQ86V81 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms