Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 NSD1-211ENST00000511258 809 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AL353770.1-201ENST00000614915 403 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC103691.2-201ENST00000618824 433 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC009093.2-202ENST00000620513 2079 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC011742.3-201ENST00000439053 820 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AC005740.2-201ENST00000511085 419 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 RTN3P1-201ENST00000536295 711 ntBASIC13.04□□□□□ -0.32
CSMD2Q7Z408 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CSMD2Q7Z408 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC243562.2-201ENST00000561247 970 ntBASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC012044.1-201ENST00000603431 297 ntBASIC13.03□□□□□ -0.32
CSMD2Q7Z408 MEG3_2.1-201ENST00000611456 105 ntBASIC13.03□□□□□ -0.32
CSMD2Q7Z408 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AL008707.1-201ENST00000422498 534 ntBASIC13.03□□□□□ -0.32
CSMD2Q7Z408 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 AC105137.3-201ENST00000617588 984 ntBASIC13.03□□□□□ -0.32
CSMD2Q7Z408 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CSMD2Q7Z408 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CSMD2Q7Z408 FLJ38576-201ENST00000623820 2459 ntBASIC13.02□□□□□ -0.32
CSMD2Q7Z408 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD2Q7Z408 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CSMD2Q7Z408 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSMD2Q7Z408 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CSMD2Q7Z408 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
CSMD2Q7Z408 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms