Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SHC4Q6S5L8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 KRT8P12-202ENST00000472924 1397 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 AC148477.4-201ENST00000613430 1793 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 LINC00528-201ENST00000600723 2160 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 TARDBPP1-201ENST00000442013 1203 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 AC023141.5-201ENST00000458585 616 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 MIR3687-2-201ENST00000577708 61 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 MIR3687-1-201ENST00000614492 61 ntBASIC17.82■□□□□ 0.44
SHC4Q6S5L8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.82■□□□□ 0.44
SHC4Q6S5L8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 AC074338.1-201ENST00000416825 156 ntBASIC17.81■□□□□ 0.44
SHC4Q6S5L8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.81■□□□□ 0.44
SHC4Q6S5L8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms