Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 SPDYE11-202ENST00000450699 704 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 SPDYE9P-201ENST00000570642 692 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AC061975.2-201ENST00000581722 295 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 SPDYE10P-202ENST00000612005 668 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 SPDYE8P-202ENST00000612377 668 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 FOXO1B-201ENST00000504678 1527 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 TMBIM7P-203ENST00000641617 1718 ntBASIC16.22■□□□□ 0.19
CASC4Q6P4E1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CASC4Q6P4E1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.21■□□□□ 0.19
CASC4Q6P4E1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 AC026396.1-201ENST00000419388 421 ntBASIC16.21■□□□□ 0.19
CASC4Q6P4E1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 IGHV3-62-201ENST00000520057 340 ntBASIC16.21■□□□□ 0.19
CASC4Q6P4E1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 AC092902.6-201ENST00000641783 218 ntBASIC16.21■□□□□ 0.19
CASC4Q6P4E1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.21■□□□□ 0.19
CASC4Q6P4E1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.21■□□□□ 0.18
CASC4Q6P4E1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AL691432.1-201ENST00000596308 1422 ntBASIC16.2■□□□□ 0.18
CASC4Q6P4E1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms