Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC092850.2-201ENST00000623821 2697 ntBASIC15.03■□□□□ -0
TMEM35AQ53FP2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC100757.3-201ENST00000622361 1406 ntBASIC15.03■□□□□ -0
TMEM35AQ53FP2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 SLED1-202ENST00000512051 380 ntBASIC15.03■□□□□ -0
TMEM35AQ53FP2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 DUX4L27-201ENST00000554796 1261 ntBASIC15.03■□□□□ -0
TMEM35AQ53FP2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 AL590560.3-201ENST00000623350 461 ntBASIC15.03■□□□□ -0
TMEM35AQ53FP2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.03■□□□□ -0
TMEM35AQ53FP2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TMEM35AQ53FP2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 AC090616.6-203ENST00000579186 1945 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 AL513477.1-201ENST00000602865 2407 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 AC055876.3-201ENST00000431496 288 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 IGHV3-42-201ENST00000520410 361 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 AC138649.4-201ENST00000612222 287 ntBASIC15.02■□□□□ -0
TMEM35AQ53FP2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TMEM35AQ53FP2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.02■□□□□ -0
TMEM35AQ53FP2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TMEM35AQ53FP2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms