Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL138799.1-201ENST00000448213 1675 ntBASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM71Q2Q1W2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 PKD1P5-201ENST00000532415 10291 ntBASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM71Q2Q1W2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM71Q2Q1W2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM71Q2Q1W2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms