Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.9■□□□□ 0.3
CDR2Q01850 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 AC134684.3-201ENST00000641758 218 ntBASIC16.9■□□□□ 0.3
CDR2Q01850 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.9■□□□□ 0.3
CDR2Q01850 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDR2Q01850 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDR2Q01850 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDR2Q01850 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.89■□□□□ 0.3
CDR2Q01850 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDR2Q01850 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CDR2Q01850 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.3
CDR2Q01850 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDR2Q01850 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDR2Q01850 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDR2Q01850 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.89■□□□□ 0.29
CDR2Q01850 FO393414.2-201ENST00000405153 598 ntBASIC16.89■□□□□ 0.29
CDR2Q01850 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 AL512356.2-201ENST00000546955 174 ntBASIC16.89■□□□□ 0.29
CDR2Q01850 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDR2Q01850 MIR6080-201ENST00000617359 66 ntBASIC16.89■□□□□ 0.29
CDR2Q01850 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.89■□□□□ 0.29
CDR2Q01850 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.89■□□□□ 0.29
CDR2Q01850 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDR2Q01850 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.89■□□□□ 0.29
CDR2Q01850 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDR2Q01850 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.88■□□□□ 0.29
CDR2Q01850 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.88■□□□□ 0.29
CDR2Q01850 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDR2Q01850 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDR2Q01850 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDR2Q01850 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDR2Q01850 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.88■□□□□ 0.29
CDR2Q01850 SPDYE7P-202ENST00000420373 878 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.88■□□□□ 0.29
CDR2Q01850 AC004967.1-201ENST00000453589 447 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CDR2Q01850 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.88■□□□□ 0.29
CDR2Q01850 AC027612.4-201ENST00000605371 583 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.88■□□□□ 0.29
CDR2Q01850 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
CDR2Q01850 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.88■□□□□ 0.29
CDR2Q01850 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 AL607033.1-201ENST00000623900 1599 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDR2Q01850 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 KRT8P12-202ENST00000472924 1397 ntBASIC16.88■□□□□ 0.29
CDR2Q01850 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDR2Q01850 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms