Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 RN7SL752P-201ENST00000463779 287 ntBASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 CHCHD2P3-201ENST00000603038 451 ntBASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 AC126177.1-201ENST00000547829 2218 ntBASIC18.15■□□□□ 0.5
CHMP4BP1P59074 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP4BP1P59074 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CHMP4BP1P59074 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP4BP1P59074 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.14■□□□□ 0.5
CHMP4BP1P59074 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP4BP1P59074 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 INE1-201ENST00000456273 945 ntBASIC18.14■□□□□ 0.49
CHMP4BP1P59074 SERBP1P3-201ENST00000459980 809 ntBASIC18.14■□□□□ 0.49
CHMP4BP1P59074 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC026979.3-201ENST00000607315 403 ntBASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC004790.1-201ENST00000612686 536 ntBASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC007431.3-201ENST00000623221 587 ntBASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP4BP1P59074 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 ATP5G2P4-201ENST00000442175 420 ntBASIC18.13■□□□□ 0.49
CHMP4BP1P59074 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 WASH4P-201ENST00000564273 1246 ntBASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AL359881.2-201ENST00000602973 570 ntBASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AL109936.8-201ENST00000641772 604 ntBASIC18.13■□□□□ 0.49
CHMP4BP1P59074 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms