Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RHBDL3P58872 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RHBDL3P58872 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 ACTBP11-201ENST00000436287 1126 ntBASIC18.5■□□□□ 0.55
RHBDL3P58872 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.5■□□□□ 0.55
RHBDL3P58872 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.5■□□□□ 0.55
RHBDL3P58872 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 AL118508.1-201ENST00000613502 2345 ntBASIC18.5■□□□□ 0.55
RHBDL3P58872 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RHBDL3P58872 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.5■□□□□ 0.55
RHBDL3P58872 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RHBDL3P58872 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.49■□□□□ 0.55
RHBDL3P58872 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.49■□□□□ 0.55
RHBDL3P58872 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RHBDL3P58872 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.49■□□□□ 0.55
RHBDL3P58872 AC145423.3-201ENST00000615987 467 ntBASIC18.49■□□□□ 0.55
RHBDL3P58872 RHOXF1P1-202ENST00000635473 501 ntBASIC18.49■□□□□ 0.55
RHBDL3P58872 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RHBDL3P58872 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.49■□□□□ 0.55
RHBDL3P58872 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RHBDL3P58872 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RHBDL3P58872 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RHBDL3P58872 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.49■□□□□ 0.55
RHBDL3P58872 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RHBDL3P58872 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RHBDL3P58872 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RHBDL3P58872 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.48■□□□□ 0.55
RHBDL3P58872 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 BX539320.1-201ENST00000623759 877 ntBASIC18.48■□□□□ 0.55
RHBDL3P58872 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.48■□□□□ 0.55
RHBDL3P58872 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
RHBDL3P58872 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RHBDL3P58872 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RHBDL3P58872 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RHBDL3P58872 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.47■□□□□ 0.55
RHBDL3P58872 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.47■□□□□ 0.55
RHBDL3P58872 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms