Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK2P53671 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK2P53671 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK2P53671 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.99■□□□□ 0.15
LIMK2P53671 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK2P53671 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.99■□□□□ 0.15
LIMK2P53671 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK2P53671 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.99■□□□□ 0.15
LIMK2P53671 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.99■□□□□ 0.15
LIMK2P53671 AL158211.3-201ENST00000607385 239 ntBASIC15.99■□□□□ 0.15
LIMK2P53671 SPTSSB-204ENST00000617024 1292 ntBASIC15.99■□□□□ 0.15
LIMK2P53671 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LIMK2P53671 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 AL691432.1-201ENST00000596308 1422 ntBASIC15.99■□□□□ 0.15
LIMK2P53671 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LIMK2P53671 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LIMK2P53671 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK2P53671 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.99■□□□□ 0.15
LIMK2P53671 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LIMK2P53671 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LIMK2P53671 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.98■□□□□ 0.15
LIMK2P53671 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
LIMK2P53671 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.98■□□□□ 0.15
LIMK2P53671 AC069120.2-201ENST00000524091 540 ntBASIC15.98■□□□□ 0.15
LIMK2P53671 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.98■□□□□ 0.15
LIMK2P53671 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
LIMK2P53671 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.98■□□□□ 0.15
LIMK2P53671 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LIMK2P53671 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LIMK2P53671 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.97■□□□□ 0.15
LIMK2P53671 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 AL513477.1-201ENST00000602865 2407 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LIMK2P53671 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.97■□□□□ 0.15
LIMK2P53671 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.97■□□□□ 0.15
LIMK2P53671 BNIP3P1-202ENST00000550043 1585 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.97■□□□□ 0.15
LIMK2P53671 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LIMK2P53671 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms