Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PRIM2P49643 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.14■□□□□ 0.01
PRIM2P49643 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.14■□□□□ 0.01
PRIM2P49643 AL138918.1-201ENST00000568306 659 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.14■□□□□ 0.01
PRIM2P49643 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.14■□□□□ 0.01
PRIM2P49643 AC026120.1-201ENST00000611536 926 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 C20orf181-201ENST00000623918 480 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.14■□□□□ 0.01
PRIM2P49643 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PPT1-215ENST00000641471 2368 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 AC020658.6-201ENST00000623564 1870 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PRIM2P49643 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
PRIM2P49643 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.14■□□□□ 0.01
PRIM2P49643 AP001282.1-201ENST00000531301 1499 ntBASIC15.14■□□□□ 0.01
PRIM2P49643 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRIM2P49643 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PRIM2P49643 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PRIM2P49643 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.13■□□□□ 0.01
PRIM2P49643 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.13■□□□□ 0.01
PRIM2P49643 MKNK2P1-201ENST00000437526 628 ntBASIC15.13■□□□□ 0.01
PRIM2P49643 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PRIM2P49643 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PRIM2P49643 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.13■□□□□ 0.01
PRIM2P49643 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.13■□□□□ 0.01
PRIM2P49643 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.13■□□□□ 0.01
PRIM2P49643 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRIM2P49643 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 AC136621.1-201ENST00000624017 2304 ntBASIC15.12■□□□□ 0.01
PRIM2P49643 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms