Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
CX3CR1P49238 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CX3CR1P49238 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.98□□□□□ -0.17
CX3CR1P49238 KRT8P23-201ENST00000560090 1207 ntBASIC13.98□□□□□ -0.17
CX3CR1P49238 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CX3CR1P49238 MTDHP5-201ENST00000598980 586 ntBASIC13.98□□□□□ -0.17
CX3CR1P49238 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CX3CR1P49238 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CR1P49238 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CR1P49238 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 AC013268.4-201ENST00000637413 2228 ntBASIC13.98□□□□□ -0.17
CX3CR1P49238 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CX3CR1P49238 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.98□□□□□ -0.17
CX3CR1P49238 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CX3CR1P49238 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 MIR346-201ENST00000362234 95 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 AC004987.2-201ENST00000395959 1148 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 RPS8P6-201ENST00000426177 609 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 HTR5BP-201ENST00000430851 1154 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 MKNK2P1-201ENST00000437526 628 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 ALG1L5P-201ENST00000482043 771 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.97□□□□□ -0.17
CX3CR1P49238 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.97□□□□□ -0.17
CX3CR1P49238 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.97□□□□□ -0.17
CX3CR1P49238 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 AC087481.3-201ENST00000602886 1894 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CX3CR1P49238 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CX3CR1P49238 AC018892.3-201ENST00000623986 2499 ntBASIC13.97□□□□□ -0.17
CX3CR1P49238 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CX3CR1P49238 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CX3CR1P49238 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 REXO1L1P-202ENST00000608646 1974 ntBASIC13.96□□□□□ -0.17
CX3CR1P49238 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 TMBIM7P-203ENST00000641617 1718 ntBASIC13.96□□□□□ -0.17
CX3CR1P49238 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 TNRC18P2-201ENST00000417666 2714 ntBASIC13.96□□□□□ -0.17
CX3CR1P49238 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CX3CR1P49238 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CX3CR1P49238 AL592309.1-201ENST00000443127 649 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms