Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 AL589739.1-201ENST00000607720 493 ntBASIC14.13□□□□□ -0.15
CSNK1A1P48729 AL133215.2-201ENST00000609242 977 ntBASIC14.13□□□□□ -0.15
CSNK1A1P48729 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.13□□□□□ -0.15
CSNK1A1P48729 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CSNK1A1P48729 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CSNK1A1P48729 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AL161772.1-201ENST00000610494 4412 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 HYMAI-201ENST00000635591 3347 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 SPDYE17-201ENST00000412399 783 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AC125807.1-201ENST00000483097 614 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 TUBB3P1-201ENST00000405796 1332 ntBASIC14.12□□□□□ -0.15
CSNK1A1P48729 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.12□□□□□ -0.15
CSNK1A1P48729 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CSNK1A1P48729 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CSNK1A1P48729 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms