Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
PCP4P48539 ERBB2-204ENST00000541774 4341 ntTSL 5 BASIC10.56□□□□□ -0.72
PCP4P48539 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PCP4P48539 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PCP4P48539 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.56□□□□□ -0.72
PCP4P48539 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
PCP4P48539 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC10.56□□□□□ -0.72
PCP4P48539 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC10.56□□□□□ -0.72
PCP4P48539 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.56□□□□□ -0.72
PCP4P48539 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 AL391256.1-201ENST00000443260 1855 ntBASIC10.55□□□□□ -0.72
PCP4P48539 AC009533.1-201ENST00000539757 3158 ntBASIC10.55□□□□□ -0.72
PCP4P48539 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC10.55□□□□□ -0.72
PCP4P48539 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CHTF8-201ENST00000306585 2561 ntBASIC10.55□□□□□ -0.72
PCP4P48539 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CYP1A1-202ENST00000395048 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 LILRB1-208ENST00000427581 2751 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 VOPP1-208ENST00000433959 2900 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 LRTM2-202ENST00000535041 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC10.55□□□□□ -0.72
PCP4P48539 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 RSBN1-206ENST00000616024 2703 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC10.55□□□□□ -0.72
PCP4P48539 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
PCP4P48539 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
PCP4P48539 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
PCP4P48539 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
PCP4P48539 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
PCP4P48539 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 AL137127.1-201ENST00000606379 3402 ntBASIC10.54□□□□□ -0.72
PCP4P48539 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.54□□□□□ -0.72
PCP4P48539 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.54□□□□□ -0.72
PCP4P48539 AC023090.2-201ENST00000625182 2110 ntBASIC10.54□□□□□ -0.72
PCP4P48539 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.54□□□□□ -0.72
PCP4P48539 ZNF608-210ENST00000613878 3190 ntTSL 5 BASIC10.54□□□□□ -0.72
PCP4P48539 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 TIAM2-201ENST00000275246 2491 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
PCP4P48539 PUM3-202ENST00000397885 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.54□□□□□ -0.72
PCP4P48539 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
PCP4P48539 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
PCP4P48539 TMEM198B-204ENST00000484016 896 ntBASIC10.54□□□□□ -0.72
PCP4P48539 INGX-202ENST00000489074 768 ntBASIC10.54□□□□□ -0.72
PCP4P48539 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC10.54□□□□□ -0.72
PCP4P48539 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms