Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
COL15A1P39059 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
COL15A1P39059 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.83■□□□□ 0.76
COL15A1P39059 KRT18P25-201ENST00000508931 1278 ntBASIC19.83■□□□□ 0.76
COL15A1P39059 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
COL15A1P39059 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.83■□□□□ 0.76
COL15A1P39059 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.83■□□□□ 0.76
COL15A1P39059 AP005019.2-201ENST00000615104 511 ntBASIC19.83■□□□□ 0.76
COL15A1P39059 AC145423.3-201ENST00000615987 467 ntBASIC19.83■□□□□ 0.76
COL15A1P39059 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.83■□□□□ 0.76
COL15A1P39059 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL15A1P39059 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 AL603832.2-201ENST00000566195 2125 ntBASIC19.82■□□□□ 0.76
COL15A1P39059 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.82■□□□□ 0.76
COL15A1P39059 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
COL15A1P39059 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 AC112504.1-201ENST00000623415 1841 ntBASIC19.82■□□□□ 0.76
COL15A1P39059 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.82■□□□□ 0.76
COL15A1P39059 MIR4741-201ENST00000579822 90 ntBASIC19.82■□□□□ 0.76
COL15A1P39059 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.82■□□□□ 0.76
COL15A1P39059 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.82■□□□□ 0.76
COL15A1P39059 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL15A1P39059 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
COL15A1P39059 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 KRT8P35-201ENST00000483942 1338 ntBASIC19.81■□□□□ 0.76
COL15A1P39059 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 SUN1-204ENST00000403868 978 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
COL15A1P39059 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.81■□□□□ 0.76
COL15A1P39059 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.81■□□□□ 0.76
COL15A1P39059 AC104306.2-201ENST00000451877 341 ntBASIC19.81■□□□□ 0.76
COL15A1P39059 LINC02447-202ENST00000501888 2146 ntBASIC19.81■□□□□ 0.76
COL15A1P39059 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.81■□□□□ 0.76
COL15A1P39059 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 AL022328.3-201ENST00000607943 679 ntBASIC19.81■□□□□ 0.76
COL15A1P39059 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL15A1P39059 AL008638.5-201ENST00000623814 1298 ntBASIC19.81■□□□□ 0.76
COL15A1P39059 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL15A1P39059 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.81■□□□□ 0.76
COL15A1P39059 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.8■□□□□ 0.76
COL15A1P39059 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.8■□□□□ 0.76
COL15A1P39059 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL15A1P39059 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms