Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.73■□□□□ 0.11
HMGCLP35914 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 AC135586.1-201ENST00000539323 574 ntBASIC15.73■□□□□ 0.11
HMGCLP35914 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HMGCLP35914 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HMGCLP35914 AF228730.6-201ENST00000641497 218 ntBASIC15.73■□□□□ 0.11
HMGCLP35914 AC084121.3-201ENST00000641716 218 ntBASIC15.73■□□□□ 0.11
HMGCLP35914 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HMGCLP35914 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
HMGCLP35914 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HMGCLP35914 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HMGCLP35914 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGCLP35914 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGCLP35914 FAM8A3P-201ENST00000427218 844 ntBASIC15.72■□□□□ 0.11
HMGCLP35914 KRT18P64-201ENST00000434946 1219 ntBASIC15.72■□□□□ 0.11
HMGCLP35914 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGCLP35914 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.72■□□□□ 0.11
HMGCLP35914 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.72■□□□□ 0.11
HMGCLP35914 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 TIMM17BP1-201ENST00000545713 516 ntBASIC15.72■□□□□ 0.11
HMGCLP35914 SPCS2P1-201ENST00000561636 679 ntBASIC15.72■□□□□ 0.11
HMGCLP35914 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.72■□□□□ 0.11
HMGCLP35914 AL096865.1-201ENST00000606796 927 ntBASIC15.72■□□□□ 0.11
HMGCLP35914 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.72■□□□□ 0.11
HMGCLP35914 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HMGCLP35914 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.72■□□□□ 0.11
HMGCLP35914 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HMGCLP35914 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.71■□□□□ 0.11
HMGCLP35914 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 AC011467.4-201ENST00000594891 528 ntBASIC15.71■□□□□ 0.11
HMGCLP35914 SRD5A3P1-201ENST00000603021 949 ntBASIC15.71■□□□□ 0.11
HMGCLP35914 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 AC009090.5-201ENST00000624886 2285 ntBASIC15.71■□□□□ 0.11
HMGCLP35914 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.71■□□□□ 0.11
HMGCLP35914 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.71■□□□□ 0.11
HMGCLP35914 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HMGCLP35914 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGCLP35914 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HMGCLP35914 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.71■□□□□ 0.1
HMGCLP35914 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HMGCLP35914 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms