Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 U82695.1-201ENST00000635752 1889 ntBASIC13.78□□□□□ -0.2
HLA-DMAP28067 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AF228730.7-201ENST00000641842 219 ntBASIC13.78□□□□□ -0.2
HLA-DMAP28067 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AC092135.3-201ENST00000624151 1846 ntBASIC13.78□□□□□ -0.2
HLA-DMAP28067 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.78□□□□□ -0.2
HLA-DMAP28067 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HLA-DMAP28067 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.78□□□□□ -0.2
HLA-DMAP28067 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HLA-DMAP28067 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HLA-DMAP28067 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HLA-DMAP28067 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HLA-DMAP28067 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HLA-DMAP28067 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.77□□□□□ -0.2
HLA-DMAP28067 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 NUS1P2-201ENST00000417358 873 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 AP002383.4-201ENST00000442518 975 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 DUX4L26-201ENST00000489078 1255 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SLC25A6P2-201ENST00000497974 877 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 AC104819.1-201ENST00000504587 486 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 AC005332.1-201ENST00000577698 1310 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 AL589182.2-201ENST00000619332 1049 ntBASIC13.77□□□□□ -0.21
HLA-DMAP28067 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HLA-DMAP28067 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HLA-DMAP28067 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms