Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.65■□□□□ 0.26
RARAP10276 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RARAP10276 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.65■□□□□ 0.26
RARAP10276 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RARAP10276 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 RBPMS2P1-201ENST00000437762 623 ntBASIC16.65■□□□□ 0.26
RARAP10276 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.65■□□□□ 0.26
RARAP10276 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RARAP10276 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.65■□□□□ 0.26
RARAP10276 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
RARAP10276 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RARAP10276 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
RARAP10276 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
RARAP10276 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.64■□□□□ 0.25
RARAP10276 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RARAP10276 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.64■□□□□ 0.25
RARAP10276 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.64■□□□□ 0.25
RARAP10276 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.64■□□□□ 0.25
RARAP10276 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.64■□□□□ 0.25
RARAP10276 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.64■□□□□ 0.25
RARAP10276 BANF1P1-201ENST00000553684 263 ntBASIC16.64■□□□□ 0.25
RARAP10276 MIR4313-201ENST00000580760 101 ntBASIC16.64■□□□□ 0.25
RARAP10276 AC026979.3-201ENST00000607315 403 ntBASIC16.64■□□□□ 0.25
RARAP10276 AC018529.1-201ENST00000613063 361 ntBASIC16.64■□□□□ 0.25
RARAP10276 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.64■□□□□ 0.25
RARAP10276 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 C18orf15-201ENST00000623680 2534 ntBASIC16.64■□□□□ 0.25
RARAP10276 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RARAP10276 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.64■□□□□ 0.25
RARAP10276 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 AC091951.1-201ENST00000512854 2465 ntBASIC16.63■□□□□ 0.25
RARAP10276 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RARAP10276 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 SPDYE14P-201ENST00000442619 822 ntBASIC16.63■□□□□ 0.25
RARAP10276 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 AC026150.2-201ENST00000564693 1156 ntBASIC16.63■□□□□ 0.25
RARAP10276 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 AC009093.7-201ENST00000623853 1223 ntBASIC16.63■□□□□ 0.25
RARAP10276 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RARAP10276 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.63■□□□□ 0.25
RARAP10276 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RARAP10276 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms