Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL513480.1-201ENST00000451731 511 ntBASIC13.2□□□□□ -0.3
CTSDP07339 AC108073.2-201ENST00000464002 357 ntBASIC13.2□□□□□ -0.3
CTSDP07339 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.2□□□□□ -0.3
CTSDP07339 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 AL356488.2-201ENST00000602755 427 ntBASIC13.2□□□□□ -0.3
CTSDP07339 AC004790.2-201ENST00000623588 572 ntBASIC13.2□□□□□ -0.3
CTSDP07339 AC005593.1-201ENST00000624894 515 ntBASIC13.2□□□□□ -0.3
CTSDP07339 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.2□□□□□ -0.3
CTSDP07339 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 AC005912.2-201ENST00000619492 2400 ntBASIC13.2□□□□□ -0.3
CTSDP07339 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.2□□□□□ -0.3
CTSDP07339 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CTSDP07339 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.19□□□□□ -0.3
CTSDP07339 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 AC007686.3-201ENST00000619017 3487 ntBASIC13.19□□□□□ -0.3
CTSDP07339 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 RPS2P1-201ENST00000434010 821 ntBASIC13.19□□□□□ -0.3
CTSDP07339 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CTSDP07339 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.19□□□□□ -0.3
CTSDP07339 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CTSDP07339 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
CTSDP07339 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSDP07339 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSDP07339 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 AC018892.3-201ENST00000623986 2499 ntBASIC13.18□□□□□ -0.3
CTSDP07339 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSDP07339 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms