Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AC140113.2-201ENST00000604370 208 ntBASIC14.32□□□□□ -0.12
HLA-DPB1P04440 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DPB1P04440 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AC096734.2-201ENST00000562054 433 ntBASIC14.31□□□□□ -0.12
HLA-DPB1P04440 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AC027601.4-201ENST00000611259 610 ntBASIC14.31□□□□□ -0.12
HLA-DPB1P04440 GRK6P1-201ENST00000400595 1711 ntBASIC14.31□□□□□ -0.12
HLA-DPB1P04440 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AC013726.1-201ENST00000563747 2285 ntBASIC14.31□□□□□ -0.12
HLA-DPB1P04440 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DPB1P04440 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AP000347.1-202ENST00000435868 847 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 KRT18P3-201ENST00000451602 1288 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 MIR4515-201ENST00000584082 81 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 AC112693.3-201ENST00000624819 1983 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 BCAR1-209ENST00000546196 1340 ntBASIC14.3□□□□□ -0.12
HLA-DPB1P04440 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPB1P04440 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms