Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
TCRAP04437 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TCRAP04437 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 AKR1C7P-201ENST00000305623 895 ntBASIC12.1□□□□□ -0.47
TCRAP04437 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TCRAP04437 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 TSPY19P-201ENST00000418461 509 ntBASIC12.1□□□□□ -0.47
TCRAP04437 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 TSPY18P-201ENST00000441642 509 ntBASIC12.1□□□□□ -0.47
TCRAP04437 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRAP04437 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRAP04437 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRAP04437 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 AC073648.2-201ENST00000510116 352 ntBASIC12.1□□□□□ -0.47
TCRAP04437 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.1□□□□□ -0.47
TCRAP04437 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.1□□□□□ -0.47
TCRAP04437 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 AC105339.3-201ENST00000560043 636 ntBASIC12.1□□□□□ -0.47
TCRAP04437 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 LINC01711-201ENST00000598340 967 ntBASIC12.1□□□□□ -0.47
TCRAP04437 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRAP04437 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.1□□□□□ -0.47
TCRAP04437 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TCRAP04437 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TCRAP04437 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TCRAP04437 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.1□□□□□ -0.47
TCRAP04437 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AC067750.1-201ENST00000608826 6545 ntBASIC12.09□□□□□ -0.47
TCRAP04437 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TCRAP04437 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TCRAP04437 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
TCRAP04437 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 AL645939.2-201ENST00000427340 991 ntBASIC12.09□□□□□ -0.47
TCRAP04437 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.09□□□□□ -0.47
TCRAP04437 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 AC243562.2-201ENST00000561247 970 ntBASIC12.09□□□□□ -0.47
TCRAP04437 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.09□□□□□ -0.47
TCRAP04437 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TCRAP04437 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
TCRAP04437 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms