Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.64■□□□□ 0.25
APOEP02649 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
APOEP02649 AC134407.2-201ENST00000625089 1978 ntBASIC16.64■□□□□ 0.25
APOEP02649 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOEP02649 BNIP3P1-202ENST00000550043 1585 ntBASIC16.64■□□□□ 0.25
APOEP02649 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
APOEP02649 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOEP02649 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 KRT8P37-201ENST00000451609 1420 ntBASIC16.63■□□□□ 0.25
APOEP02649 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
APOEP02649 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.63■□□□□ 0.25
APOEP02649 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.63■□□□□ 0.25
APOEP02649 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.63■□□□□ 0.25
APOEP02649 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.63■□□□□ 0.25
APOEP02649 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.63■□□□□ 0.25
APOEP02649 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.63■□□□□ 0.25
APOEP02649 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.63■□□□□ 0.25
APOEP02649 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.63■□□□□ 0.25
APOEP02649 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOEP02649 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 AC069224.1-201ENST00000566372 1715 ntBASIC16.62■□□□□ 0.25
APOEP02649 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 FO393414.2-201ENST00000405153 598 ntBASIC16.62■□□□□ 0.25
APOEP02649 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.62■□□□□ 0.25
APOEP02649 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.62■□□□□ 0.25
APOEP02649 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.62■□□□□ 0.25
APOEP02649 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 SPCS2P1-201ENST00000561636 679 ntBASIC16.62■□□□□ 0.25
APOEP02649 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.62■□□□□ 0.25
APOEP02649 AL033527.5-202ENST00000641632 1098 ntBASIC16.62■□□□□ 0.25
APOEP02649 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.62■□□□□ 0.25
APOEP02649 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
APOEP02649 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOEP02649 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
APOEP02649 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APOEP02649 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.61■□□□□ 0.25
APOEP02649 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms